Multiple Alignment with all
H2B
protein sequences
MUSCLE (3.8) multiple sequence alignment
H2B.4|ClusterVI|protein -MANLVARKA--KKSKPA--RKPQNQSRRESFKIYIYRLLKSCHRDMEISQKAMSCVNSF
H2B.3|ClusterIII|protein -MPRGRPRKNPEDPSAPKKASRKGKERKNQSFKTHIYKVLKQVHPDTGMSSNAMSIMNSF
H2B.1|ClusterII|protein MAATKGSKKAIVKKAPPAGEKKKRRAKRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSF
H2B.1|ClusterVII|protein MAATKGSKKAIVKKAPPAGEKKKRRAKRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSF
H2B.2|ClusterVIII|protein MAATKGSKKAIVKKAPPAGDKKKRRAKRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSF
H2B.2|ClusterXII|protein MAATKGSKKAIVKKAPPAGDKKKRRAKRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSF
H2B.2|ClusterXX|protein MAATKGSKKAIVKKAPPAGDKKKRRAKRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSF
H2B.t1|ClusterIX|protein ----------MARTAP-----RKYNKARKQSFGIYIYKVLKQVHPDQGISSKAMSIMNSF
H2B.t1|ClusterX|protein ----------MARTAP-----RKYNKARKQSFGIYIYKVLKQVHPDQGISSKAMSIMNSF
H2B.t2|ClusterI|protein ------MPKNVSKAAKPAAGARKYRKARKESFGIYIYKVLKQVHPDQGISTKAMSIMNSF
H2B.t3|ClusterXI|protein ------MPKNVSKAAKPAAGARKYRKSRKESFGIYIYKVLKQVHPDQGISTKAMSIMNSF
: . . ..:*: :**.:**. * * :* :*** :***
H2B.4|ClusterVI|protein VMDMFERLAGEASKLASLSKRSTISTNDIQFSVDLVIGKELAKHAKGGALRHLHKYAANR
H2B.3|ClusterIII|protein VNDIFDRIANEASRLAAINKKSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSR
H2B.1|ClusterII|protein VSDIFERIANEASRLAKYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
H2B.1|ClusterVII|protein VSDIFERIANEASRLAKYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
H2B.2|ClusterVIII|protein VSDIFERIANEASRLAKYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
H2B.2|ClusterXII|protein VSDIFERIANEASRLAKYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
H2B.2|ClusterXX|protein VSDIFERIANEASRLAKYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
H2B.t1|ClusterIX|protein VCDIFDRVGCEASRLAKINKKATISSREIQTACRLLFPGELSKHAISEGTKAVTKYTASK
H2B.t1|ClusterX|protein VCDIFDRVGCEASRLAKINKKATISSREIQTACRLLFPGELSKHAISEGTKAVTKYTASK
H2B.t2|ClusterI|protein VNDIFDRVGCEASRLAKINKKSTISSREIQTACRLLFPGELSKHAVSEGTKAVSKYTASK
H2B.t3|ClusterXI|protein VNDIFDRVGCEASRLAKINKKSTISSREIQTACRLLFPGELSKHAVSEGTKAVSKYTASK
* *:*:*:. ***.** .*.:***:.::* : *:: **:*** . . . : **::..
H2B.4|ClusterVI|protein HL
H2B.3|ClusterIII|protein V-
H2B.1|ClusterII|protein --
H2B.1|ClusterVII|protein --
H2B.2|ClusterVIII|protein --
H2B.2|ClusterXII|protein --
H2B.2|ClusterXX|protein --
H2B.t1|ClusterIX|protein --
H2B.t1|ClusterX|protein --
H2B.t2|ClusterI|protein --
H2B.t3|ClusterXI|protein --
This aligment has been done with
muscle3.8.1 (linux 64 Bits)