Multiple Alignment with all H3 protein sequences
This aligment has been done with muscle3.8.1 (linux 64 Bits)MUSCLE (3.8) multiple sequence alignment H3.Cen|ClusterV|protein MVR-----------------------RKTPPK----KKKER------CIEEIRRYQKSTE H3.sh|ClusterVIII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE H3.2|ClusterII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE H3.2|ClusterIII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE H3.2|ClusterVII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE H3.3|ClusterXIV|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE H3.3|ClusterXVIII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE H3.t3|ClusterXVII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPTIGGIKKPHRYRPGTVALREIRRYQKSTE H3.t1|ClusterXIII|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGIKKPHRYRPGTVALREIRRYQKSTE H3.t2|ClusterIX|protein MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRRYQKSTE *.* **:.* ** * .: ********** H3.Cen|ClusterV|protein LLMRKMPFQRVVREVVSELRPGNVLRWQADALVCLQEATENILVTLFEVANLYAVHAKRV H3.sh|ClusterVIII|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSSGGCPDRVGSD-------------------- H3.2|ClusterII|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRV H3.2|ClusterIII|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRV H3.2|ClusterVII|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRV H3.3|ClusterXIV|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV H3.3|ClusterXVIII|protein LLIRKLPFQRLVREIAQDFKTD--LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRV H3.t3|ClusterXVII|protein LLLRKLPFQRLVREIAQQWRND--LRFQSSAVMALQEAAEAYLVGLFEDSNLCAIHAKRV H3.t1|ClusterXIII|protein LLIRKLPFQRLVRELAQQWKSD--LRFQSSAVMALQEASEAYLVGLFEDSNLCAIHAKRV H3.t2|ClusterIX|protein LLIRKLPFQRLVREIAQQWKSD--LRFQSSAVMALQEASEAYLVGLFEDSNLCAIHAKRV **:**:****:***:..: . . **:*: . . .:: H3.Cen|ClusterV|protein TVMTKDLQLVRRVAGMNLNGIAKK H3.sh|ClusterVIII|protein ------------------------ H3.2|ClusterII|protein TIMPKDIQLARRIRG------ERA H3.2|ClusterIII|protein TIMPKDIQLARRIRG------ERA H3.2|ClusterVII|protein TIMPKDIQLARRIRG------ERA H3.3|ClusterXIV|protein TIMPKDIQLARRIRG------ERA H3.3|ClusterXVIII|protein TIMPKDIQLARRIRG------ERA H3.t3|ClusterXVII|protein TVMPKDMWLARRIRG------ERA H3.t1|ClusterXIII|protein TVMPKDMALARRIRG------EAK H3.t2|ClusterIX|protein TVMPKDMALARRIRG------EAK